SUPERFAMILY 1.73 HMM library and genome assignments server

Domain assignment for gi|16130970|ref|NP_417546.1| from Escherichia coli K-12 subMG1655

Domain architecture


Domain assignment details

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Strong hits

Sequence:  gi|16130970|ref|NP_417546.1|
Domain Number 1 Region: 76-320
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 7.57e-43
Family L-arabinose binding protein-like 0.00031
Further Details:      
 
Domain Number 2 Region: 3-58
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 5.82e-11
Family GalR/LacI-like bacterial regulator 0.0026
Further Details:      
 

Protein sequence

External link(s) gi|16130970|ref|NP_417546.1|
Sequence length 327
Comment DNA-binding transcriptional repressor [Escherichia coli str. K-12 substr. MG1655]
Sequence
MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEKLEYKTSSARKLQTGAV
NQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTNCYEHSGLPDIKNVTGILI
VGKPTPALRAAASALTDNICFIDFHEPGSGYDAVDIDLARISKEIIDFYINQGVNRIGFI
GGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSSSSGYELAKQMLAREDYPKALFV
ASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTARFTFPPLSTVRIHSEMMGSQGVNLV
YEKARDGRALPLLVFVPSKLKLRGTTR
Download sequence
Identical sequences B1XG79 B3IFD6 B3XJQ4 P06846
gi|260857204|ref|YP_003231095.1| gi|254163021|ref|YP_003046129.1| gi|238902185|ref|YP_002927981.1| gi|170082617|ref|YP_001731937.1| gi|253772090|ref|YP_003034921.1| gi|89109844|ref|AP_003624.1| eco002003046.1 gi|251786351|ref|YP_003000655.1|

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